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  5. Solyc08g077460

Solyc08g077460


Description : SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** AT1G32740.1)


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g077460
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
A4A49_12461 No alias e3 ubiquitin-protein ligase boi 0.04 Orthogroups_2024-Update
At1g10650 No alias Putative S-ribonuclease binding protein SBP1... 0.03 Orthogroups_2024-Update
At3g12920 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.04 Orthogroups_2024-Update
Bradi3g52030 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Orthogroups_2024-Update
Bradi5g08790 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Orthogroups_2024-Update
Brara.F00712.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.01G203300 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Glyma.09G019900 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Orthogroups_2024-Update
LOC_Os11g17940 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_114475g0010 No alias (at1g45976 : 149.0) S-ribonuclease binding protein 1... 0.02 Orthogroups_2024-Update
PSME_00040898-RA No alias (at1g10650 : 137.0) SBP (S-ribonuclease binding protein)... 0.04 Orthogroups_2024-Update
Potri.002G124700 No alias S-ribonuclease binding protein 1 0.03 Orthogroups_2024-Update
Potri.010G042200 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Orthogroups_2024-Update
Potri.012G119200 No alias SBP (S-ribonuclease binding protein) family protein 0.05 Orthogroups_2024-Update
Seita.1G099000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G144500.1 No alias E3 ubiquitin ligase *(BRG) 0.03 Orthogroups_2024-Update
Solyc04g078760 No alias CONSTANS interacting protein 4 0.03 Orthogroups_2024-Update
Sopen02g018310 No alias Zinc finger, C3HC4 type (RING finger) 0.03 Orthogroups_2024-Update
Sopen03g031940 No alias Zinc finger, C3HC4 type (RING finger) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!