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  5. Solyc08g077600

Solyc08g077600


Description : LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1)


Gene families : OG_42_0000461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g077600
Cluster HCCA clusters: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
Brara.J00372.1 No alias regulatory protein *(CLSY3/4) of transacting siRNA pathway 0.03 Orthogroups_2024-Update
Solyc01g068320 No alias chromatin remodeling 31 (AHRD V3.3 *** AT1G05490.1) 0.02 Orthogroups_2024-Update
Solyc04g054440 No alias LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1) 0.02 Orthogroups_2024-Update
Solyc08g061990 No alias LOW QUALITY:chromatin remodeling 31 (AHRD V3.3 *-* AT1G05490.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 199 363
No external refs found!