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  5. Solyc01g007330

Solyc01g007330


No description available


Gene families : OG_42_0000977 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g007330
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
137874 No alias ribulose-bisphosphate carboxylases 0.05 Orthogroups_2024-Update
Bradi1g39206 No alias ribulose-bisphosphate carboxylases 0.11 Orthogroups_2024-Update
Bradi3g27325 No alias ribulose-bisphosphate carboxylases 0.02 Orthogroups_2024-Update
PSME_00008423-RA No alias (q70xz5|rbl_ambtc : 335.0) Ribulose bisphosphate... 0.05 Orthogroups_2024-Update
PSME_00014645-RA No alias (p41621|rbl_pinth : 216.0) Ribulose bisphosphate... 0.06 Orthogroups_2024-Update
PSME_00018769-RA No alias (p56648|rbl_vitvi : 182.0) Ribulose bisphosphate... 0.07 Orthogroups_2024-Update
Potri.012G062601 No alias ribulose-bisphosphate carboxylases 0.03 Orthogroups_2024-Update
Seita.J020800.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.09 Orthogroups_2024-Update
Sobic.003G172800.2 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.005G194400.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sopen03g013700 No alias Ribulose bisphosphate carboxylase large chain, N-terminal domain 0.11 Orthogroups_2024-Update
Sopen04g010010 No alias Ribulose bisphosphate carboxylase large chain, catalytic domain 0.11 Orthogroups_2024-Update
Sopen06g013320 No alias Retrotransposon gag protein 0.07 Orthogroups_2024-Update
Sopen06g016980 No alias Ribulose bisphosphate carboxylase large chain, catalytic domain 0.11 Orthogroups_2024-Update
Sopen10g008570 No alias Ribulose bisphosphate carboxylase large chain, catalytic domain 0.11 Orthogroups_2024-Update
Sopen12g025740 No alias Ribulose bisphosphate carboxylase large chain, N-terminal domain 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!