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  5. Solyc08g077640

Solyc08g077640


Description : DNA repair protein rhp54 (AHRD V3.3 *-* M8CMQ9_AEGTA)


Gene families : OG_42_0000461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g077640
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Bradi1g16720 No alias chromatin remodeling 38 0.02 Orthogroups_2024-Update
HORVU1Hr1G062970.6 No alias regulatory protein *(CLSY3/4) of transacting siRNA pathway 0.02 Orthogroups_2024-Update
Seita.9G529000.1 No alias component *(DRD1) of DNA methylation accessory complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!