LOC_Os09g21420

Description : transposon protein, putative, unclassified, expressed

Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os09g21420
Cluster	HCCA clusters: cluster_0107

Target	Alias	Description	ECC score	Gene Family Method
Glyma.17G167500	No alias	BED zinc finger ;hAT family dimerisation domain	0.03	Orthogroups_2024-Update
Solyc10g080090	No alias	BED zinc finger,hAT family dimerization domain (AHRD...	0.02	Orthogroups_2024-Update
Sopen10g003410	No alias	Domain of unknown function (DUF4413)	0.03	Orthogroups_2024-Update
Sopen12g015190	No alias	hAT family C-terminal dimerisation region	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008906	HATC_C_dom	532	608
IPR003656	Znf_BED	56	97

External Links

No external refs found!