1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g088820

Solyc01g088820


Description : LOW QUALITY:Transcription factor, putative (AHRD V3.3 *** B9SKE7_RICCO)


Gene families : OG_42_0003530 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g088820
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
Bradi3g33630 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.04 Orthogroups_2024-Update
Glyma.03G081500 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.03 Orthogroups_2024-Update
Glyma.19G118351 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!