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  5. Solyc08g077890

Solyc08g077890


Description : ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4CNE8_SOLLC)


Gene families : OG_42_0002113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g077890
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62720 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.03 Orthogroups_2024-Update
Bradi2g10278 No alias CLP protease R subunit 4 0.03 Orthogroups_2024-Update
Brara.A01840.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.05 Orthogroups_2024-Update
Cre03.g204350 No alias CLP protease R subunit 4 0.02 Orthogroups_2024-Update
Cre07.g331500 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.02 Orthogroups_2024-Update
Glyma.03G235800 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.06 Orthogroups_2024-Update
Glyma.17G147700 No alias CLP protease R subunit 4 0.03 Orthogroups_2024-Update
HORVU4Hr1G046480.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 Orthogroups_2024-Update
Mp6g21300.1 No alias non-proteolytic core component ClpR of chloroplast... 0.02 Orthogroups_2024-Update
Seita.9G407400.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.05 Orthogroups_2024-Update
Sobic.001G375000.2 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 Orthogroups_2024-Update
Sobic.003G128400.1 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 Orthogroups_2024-Update
Sopen08g026400 No alias Clp protease 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
MF GO:0050518 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0070567 cytidylyltransferase activity IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 102 283
No external refs found!