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  5. Solyc08g077900

Solyc08g077900


Description : Expansin-like protein (AHRD V3.3 *** W9S0F1_9ROSA)


Gene families : OG_42_0002700 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g077900
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G146900 No alias expansin-like B1 0.03 Orthogroups_2024-Update
Glyma.17G147200 No alias expansin-like B1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 154 237
IPR009009 RlpA-like_DPBB 66 141
No external refs found!