LOC_Os09g24650

Description : zinc finger, C3HC4 type, putative, expressed

Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os09g24650
Cluster	HCCA clusters: cluster_0125

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp8g15410.1	No alias	RING-v-class E3 ligase	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	62	107
IPR022143	DUF3675	114	227

External Links

No external refs found!