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Description : Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103XFF0_CYNCS)
Gene families : OG_42_0014228 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0014228_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc08g078080 | |
| Cluster | HCCA clusters: Cluster_105 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | Predicted GO |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Predicted GO |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
| BP | GO:0006508 | proteolysis | IEP | Predicted GO |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Predicted GO |
| MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0008238 | exopeptidase activity | IEP | Predicted GO |
| MF | GO:0009916 | alternative oxidase activity | IEP | Predicted GO |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Predicted GO |
| BP | GO:0015996 | chlorophyll catabolic process | IEP | Predicted GO |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Predicted GO |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Predicted GO |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Predicted GO |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Predicted GO |
| MF | GO:0016987 | sigma factor activity | IEP | Predicted GO |
| MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Predicted GO |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Predicted GO |
| BP | GO:0042440 | pigment metabolic process | IEP | Predicted GO |
| BP | GO:0046149 | pigment catabolic process | IEP | Predicted GO |
| MF | GO:0047746 | chlorophyllase activity | IEP | Predicted GO |
| BP | GO:0051187 | cofactor catabolic process | IEP | Predicted GO |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Predicted GO |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 114 | 141 |
| IPR002885 | Pentatricopeptide_repeat | 146 | 174 |
| IPR002885 | Pentatricopeptide_repeat | 242 | 267 |
| IPR002885 | Pentatricopeptide_repeat | 443 | 467 |
| IPR002885 | Pentatricopeptide_repeat | 178 | 204 |
| IPR002885 | Pentatricopeptide_repeat | 208 | 238 |
| IPR002885 | Pentatricopeptide_repeat | 368 | 415 |
| IPR002885 | Pentatricopeptide_repeat | 268 | 315 |
| IPR032867 | DYW_dom | 461 | 577 |
| No external refs found! |