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  5. LOC_Os09g26420

LOC_Os09g26420


Description : AP2 domain containing protein, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g26420
Cluster HCCA clusters: cluster_0056

Target Alias Description ECC score Gene Family Method Actions
73155 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
92334 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
A4A49_15089 No alias dehydration-responsive element-binding protein 3 0.03 Orthogroups_2024-Update
A4A49_21042 No alias ethylene-responsive transcription factor 4 0.03 Orthogroups_2024-Update
At1g12630 No alias Ethylene-responsive transcription factor ERF027... 0.02 Orthogroups_2024-Update
At2g36450 No alias Ethylene-responsive transcription factor ERF024... 0.03 Orthogroups_2024-Update
At4g17500 No alias Ethylene-responsive transcription factor 1A... 0.03 Orthogroups_2024-Update
At5g13330 No alias Rap2.6L [Source:UniProtKB/TrEMBL;Acc:A0A178UKL8] 0.03 Orthogroups_2024-Update
At5g25390 No alias SHN3 [Source:UniProtKB/TrEMBL;Acc:A0A178USD7] 0.03 Orthogroups_2024-Update
At5g43410 No alias Ethylene-responsive transcription factor ERF096... 0.03 Orthogroups_2024-Update
Bradi1g33550 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Brara.E00471.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G376255 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G261700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G064000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G125100 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Glyma.08G020900 No alias cytokinin response factor 2 0.02 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G014800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G197700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G077280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G018720.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.03 Orthogroups_2024-Update
HORVU6Hr1G082880.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
LOC_Os01g21120 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_28894g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_446533g0010 No alias (at4g16750 : 126.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_65190g0010 No alias (at5g19790 : 91.3) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
Mp5g06970.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
PSME_00056631-RA No alias (at5g21960 : 125.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G069300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.001G079600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G157100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G233300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G021000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s19_272V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.5G115000.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Seita.6G023700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g090560 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc10g080310 No alias Dehydration responsive element binding transcription... 0.02 Orthogroups_2024-Update
Solyc12g056980 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen04g032240 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 135 184
No external refs found!