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  5. LOC_Os09g27240

LOC_Os09g27240


Description : mitochondrial carrier protein, putative, expressed


Gene families : OG_42_0001006 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g27240
Cluster HCCA clusters: cluster_0128

Target Alias Description ECC score Gene Family Method Actions
Bradi2g12390 No alias Mitochondrial substrate carrier family protein 0.03 Orthogroups_2024-Update
LOC_Os03g07890 No alias mitochondrial carrier protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.018G050300 No alias Mitochondrial substrate carrier family protein 0.03 Orthogroups_2024-Update
Seita.9G254900.1 No alias solute transporter *(MTCC) 0.03 Orthogroups_2024-Update
Solyc12g096030 No alias LOW QUALITY:Mitochondrial carrier protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen12g031920 No alias Mitochondrial carrier protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 28 115
IPR018108 Mitochondrial_sb/sol_carrier 150 238
No external refs found!