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  5. LOC_Os09g27730

LOC_Os09g27730


Description : HVA22, putative, expressed


Gene families : OG_42_0000566 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g27730
Cluster HCCA clusters: cluster_0118

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G192700 No alias HVA22 homologue A 0.02 Orthogroups_2024-Update
Glyma.18G121600 No alias HVA22 homologue C 0.02 Orthogroups_2024-Update
Pp1s421_7V6 No alias abscisic acid-induced 0.02 Orthogroups_2024-Update
Pp1s60_68V6 No alias F7D19.18; abscisic acid-responsive HVA22 family protein... 0.02 Orthogroups_2024-Update
Seita.4G097700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G091900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 2 68
No external refs found!