LOC_Os09g28354

Description : CPuORF39 - conserved peptide uORF-containing transcript, expressed

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os09g28354
Cluster	HCCA clusters: cluster_0045

Target	Alias	Description	ECC score	Gene Family Method
A4A49_05282	No alias	heat stress transcription factor a-8	0.03	Orthogroups_2024-Update
A4A49_23517	No alias	heat stress transcription factor a-6b	0.03	Orthogroups_2024-Update
A4A49_30961	No alias	heat stress transcription factor a-6b	0.04	Orthogroups_2024-Update
A4A49_40866	No alias	heat stress transcription factor b-2b	0.03	Orthogroups_2024-Update
Bradi4g32130	No alias	heat shock factor 4	0.02	Orthogroups_2024-Update
Brara.B03785.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C02682.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C03890.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Brara.D00624.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.10G003100	No alias	heat shock transcription factor A6B	0.02	Orthogroups_2024-Update
Glyma.11G009800	No alias	heat shock factor 3	0.03	Orthogroups_2024-Update
Glyma.14G083700	No alias	heat shock transcription factor B4	0.03	Orthogroups_2024-Update
Kfl00311_0120	kfl00311_0120_v1....	(at4g17750 : 253.0) native protein is a trimer,...	0.02	Orthogroups_2024-Update
LOC_Os01g54550	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g53340	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10432269g0010	No alias	(at5g16820 : 282.0) Encodes a putative transcription...	0.03	Orthogroups_2024-Update
MA_110587g0010	No alias	(at1g46264 : 202.0) Encodes SCHIZORIZA, a member of Heat...	0.03	Orthogroups_2024-Update
MA_124940g0010	No alias	(at4g36990 : 91.7) encodes a protein whose sequence is...	0.02	Orthogroups_2024-Update
MA_29913g0010	No alias	(at3g22830 : 255.0) member of Heat Stress Transcription...	0.02	Orthogroups_2024-Update
MA_5374g0010	No alias	(at1g46264 : 191.0) Encodes SCHIZORIZA, a member of Heat...	0.03	Orthogroups_2024-Update
MA_8992661g0010	No alias	(at1g46264 : 182.0) Encodes SCHIZORIZA, a member of Heat...	0.02	Orthogroups_2024-Update
PSME_00053758-RA	No alias	(at5g62020 : 205.0) member of Heat Stress Transcription...	0.02	Orthogroups_2024-Update
Potri.006G049200	No alias	heat shock transcription factor B3	0.03	Orthogroups_2024-Update
Potri.008G157600	No alias	heat shock transcription factor A6B	0.02	Orthogroups_2024-Update
Potri.012G138900	No alias	heat shock transcription factor B2A	0.03	Orthogroups_2024-Update
Potri.014G141400	No alias	winged-helix DNA-binding transcription factor family protein	0.02	Orthogroups_2024-Update
Pp1s42_157V6	No alias	heat shock transcription factor 1	0.02	Orthogroups_2024-Update
Seita.1G025800.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.2G229700.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G225300.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G295900.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Solyc11g064990	No alias	SolycHsfB4b	0.02	Orthogroups_2024-Update
Solyc12g007070	No alias	SolycHsfC1	0.02	Orthogroups_2024-Update
Sopen08g018510	No alias	HSF-type DNA-binding	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004402	histone acetyltransferase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Predicted GO
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006839	mitochondrial transport	IEP	Predicted GO
MF	GO:0008080	N-acetyltransferase activity	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
BP	GO:0009314	response to radiation	IEP	Predicted GO
BP	GO:0009416	response to light stimulus	IEP	Predicted GO
BP	GO:0009581	detection of external stimulus	IEP	Predicted GO
BP	GO:0009582	detection of abiotic stimulus	IEP	Predicted GO
BP	GO:0009583	detection of light stimulus	IEP	Predicted GO
BP	GO:0009584	detection of visible light	IEP	Predicted GO
BP	GO:0009605	response to external stimulus	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
MF	GO:0016407	acetyltransferase activity	IEP	Predicted GO
MF	GO:0016410	N-acyltransferase activity	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
BP	GO:0018298	protein-chromophore linkage	IEP	Predicted GO
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predicted GO
BP	GO:0033365	protein localization to organelle	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Predicted GO
BP	GO:0034613	cellular protein localization	IEP	Predicted GO
CC	GO:0044455	mitochondrial membrane part	IEP	Predicted GO
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Predicted GO
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Predicted GO
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Predicted GO
BP	GO:0070585	protein localization to mitochondrion	IEP	Predicted GO
BP	GO:0070727	cellular macromolecule localization	IEP	Predicted GO
BP	GO:0071806	protein transmembrane transport	IEP	Predicted GO
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predicted GO
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Predicted GO
CC	GO:0098798	mitochondrial protein complex	IEP	Predicted GO
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	Predicted GO
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	31	120

External Links

No external refs found!

LOC_Os09g28354

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation