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  5. LOC_Os09g29120

LOC_Os09g29120


Description : GRAM domain containing protein, expressed


Gene families : OG_42_0000247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g29120
Cluster HCCA clusters: cluster_0015

Target Alias Description ECC score Gene Family Method Actions
Bradi4g07520 No alias GRAM domain family protein 0.02 Orthogroups_2024-Update
Seita.1G246800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.7G174600.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008409 5'-3' exonuclease activity IEP Predicted GO
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Predicted GO
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR004182 GRAM 68 185
No external refs found!