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  5. LOC_Os09g29130

LOC_Os09g29130


Description : ZF-HD protein dimerisation region containing protein, expressed


Gene families : OG_42_0000122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g29130
Cluster HCCA clusters: cluster_0134

Target Alias Description ECC score Gene Family Method Actions
Brara.F03112.1 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.11G068800 No alias homeobox protein 24 0.02 Orthogroups_2024-Update
Glyma.17G100000 No alias mini zinc finger 0.02 Orthogroups_2024-Update
Kfl00144_0110 kfl00144_0110_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
LOC_Os05g50310 No alias ZF-HD protein dimerisation region containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.008G086000 No alias zinc finger homeodomain 1 0.02 Orthogroups_2024-Update
Sobic.002G201100.2 No alias zf-HD-type transcription factor 0.02 Orthogroups_2024-Update
Sopen03g028760 No alias ZF-HD protein dimerisation region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 56 107
No external refs found!