Solyc08g078420

Description : ethylene-responsive transcription factor (AHRD V3.3 *-* AT5G07580.1)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc08g078420
Cluster	HCCA clusters: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
At1g15360	No alias	Ethylene-responsive transcription factor WIN1...	0.03	Orthogroups_2024-Update
At1g25470	No alias	Ethylene-responsive transcription factor ERF116...	0.03	Orthogroups_2024-Update
At2g25820	No alias	Ethylene-responsive transcription factor ERF042...	0.03	Orthogroups_2024-Update
At3g15210	No alias	Ethylene-responsive transcription factor 4...	0.03	Orthogroups_2024-Update
At5g51190	No alias	Ethylene-responsive transcription factor ERF105...	0.02	Orthogroups_2024-Update
Brara.A02830.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G076896	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G063600	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.13G060600	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.13G369400	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.14G146100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G144700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.20G195900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os01g21120	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g43790	No alias	ethylene-responsive transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g11460	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g11480	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10431529g0030	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Potri.011G056900	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Solyc01g065980	No alias	Ethylene Response Factor E.4	0.04	Orthogroups_2024-Update
Solyc03g026270	No alias	CBF	0.06	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc05g051180	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc09g066360	No alias	Ethylene Response Factor C.3	0.05	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen03g024350	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen04g006170	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen05g030580	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen05g030590	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g024300	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen10g008890	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006098	pentose-phosphate shunt	IEP	Predicted GO
BP	GO:0006739	NADP metabolic process	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	7	58

External Links

No external refs found!

Solyc08g078420

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation