LOC_Os09g31438

Description : OsSPL17 - SBP-box gene family member, expressed

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os09g31438
Cluster	HCCA clusters: cluster_0098

Target	Alias	Description	ECC score	Gene Family Method
Brara.B01839.1	No alias	SBP-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.16G054500	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.02	Orthogroups_2024-Update
HORVU0Hr1G020810.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Pp1s252_40V6	No alias	squamosa promoter-binding	0.02	Orthogroups_2024-Update
Seita.2G324900.1	No alias	SBP-type transcription factor	0.02	Orthogroups_2024-Update
Seita.7G190000.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Sopen04g017460	No alias	SBP domain	0.04	Orthogroups_2024-Update
Sopen05g011450	No alias	SBP domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006012	galactose metabolic process	IEP	Predicted GO
MF	GO:0008108	UDP-glucose:hexose-1-phosphate uridylyltransferase activity	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0070569	uridylyltransferase activity	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	74	154

External Links

No external refs found!