LOC_Os09g34870


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0004020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g34870
Cluster HCCA clusters: cluster_0030


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 220 267
IPR002885 Pentatricopeptide_repeat 453 501
IPR002885 Pentatricopeptide_repeat 192 219
IPR002885 Pentatricopeptide_repeat 324 346
IPR002885 Pentatricopeptide_repeat 295 319
IPR002885 Pentatricopeptide_repeat 354 380
IPR002885 Pentatricopeptide_repeat 602 627
IPR002885 Pentatricopeptide_repeat 94 120
No external refs found!