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  5. LOC_Os09g36900

LOC_Os09g36900


Description : WD domain, G-beta repeat domain containing protein, expressed


Gene families : OG_42_0002428 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g36900
Cluster HCCA clusters: cluster_0075

Target Alias Description ECC score Gene Family Method Actions
134213 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g36580 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
PSME_00014113-RA No alias (at5g58230 : 754.0) Encodes a WD-40 repeat containing... 0.06 Orthogroups_2024-Update
Potri.004G175300 No alias Transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update
Pp1s12_351V6 No alias multicopy suppressor of ira1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 290 330
IPR001680 WD40_repeat 158 191
IPR001680 WD40_repeat 351 386
IPR001680 WD40_repeat 246 283
IPR001680 WD40_repeat 205 240
IPR022052 Histone-bd_RBBP4_N 17 85
No external refs found!