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  5. LOC_Os09g38110

LOC_Os09g38110


Description : RING-H2 finger protein, putative, expressed


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g38110
Cluster HCCA clusters: cluster_0012

Target Alias Description ECC score Gene Family Method Actions
A4A49_19370 No alias ring-h2 finger protein atl70 0.01 Orthogroups_2024-Update
A4A49_24009 No alias ring-h2 finger protein atl3 0.02 Orthogroups_2024-Update
A4A49_59878 No alias ring-h2 finger protein atl60 0.03 Orthogroups_2024-Update
At1g49230 No alias RING-H2 finger protein ATL78... 0.05 Orthogroups_2024-Update
At2g17450 No alias Probable E3 ubiquitin-protein ligase ATL44... 0.02 Orthogroups_2024-Update
Brara.A03736.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.B03540.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03353.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.D02177.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.E02957.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.F00390.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.F01484.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.H00836.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I03307.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM2G004480 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G031280 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G301585 No alias TOXICOS EN LEVADURA 2 0.04 Orthogroups_2024-Update
GRMZM2G386584 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G447566 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G017300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G210400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G156500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G231400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.15G173800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU1Hr1G069670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G082030.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G094860.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU3Hr1G081150.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G016710.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU5Hr1G082830.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00034_0310 kfl00034_0310_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os05g45060 No alias RING-H2 finger protein ATL2M, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436028g0020 No alias (at5g01880 : 117.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_125507g0010 No alias (at5g07040 : 116.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00022170-RA No alias (at1g53820 : 134.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00051307-RA No alias (at3g18773 : 100.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00054098-RA No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.02 Orthogroups_2024-Update
Potri.002G006400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.002G165200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G235200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.010G243300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G067900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G197500.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.1G197600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Seita.1G327300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.4G172200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G205000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.7G321400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G005000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G283400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G173800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g109200 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DYT2_THECC) 0.02 Orthogroups_2024-Update
Solyc12g055710 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G72310.1) 0.02 Orthogroups_2024-Update
Sopen11g002340 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 105 148
No external refs found!