Solyc08g079120

Description : NAC domain protein, (AHRD V3.3 *** A0A061G3J0_THECC)

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc08g079120
Cluster	HCCA clusters: Cluster_293

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g63630	No alias	Arabidopsis NAC domain containing protein 87	0.02	Orthogroups_2024-Update
Bradi3g09520	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Orthogroups_2024-Update
Bradi4g34157	No alias	NAC domain containing protein 38	0.03	Orthogroups_2024-Update
Brara.A03159.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D01471.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02350.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G091490	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
GRMZM2G354151	No alias	NAC 007	0.05	Orthogroups_2024-Update
Glyma.07G050600	No alias	NAC (No Apical Meristem) domain transcriptional...	0.06	Orthogroups_2024-Update
Glyma.09G231700	No alias	NAC 007	0.03	Orthogroups_2024-Update
HORVU2Hr1G017380.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G075550.1	No alias	NAC-type transcription factor & transcriptional...	0.04	Orthogroups_2024-Update
LOC_Os08g02300	No alias	no apical meristem protein, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00053123-RA	No alias	(at5g53950 : 278.0) Transcriptional activator of the NAC...	0.02	Orthogroups_2024-Update
Potri.010G174600	No alias	NAC domain containing protein 28	0.03	Orthogroups_2024-Update
Potri.015G004100	No alias	NAC domain containing protein 62	0.03	Orthogroups_2024-Update
Sobic.002G290900.1	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0004175	endopeptidase activity	IEP	Predicted GO
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
CC	GO:0005666	RNA polymerase III complex	IEP	Predicted GO
BP	GO:0006383	transcription by RNA polymerase III	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
CC	GO:0030880	RNA polymerase complex	IEP	Predicted GO
MF	GO:0033897	ribonuclease T2 activity	IEP	Predicted GO
MF	GO:0045735	nutrient reservoir activity	IEP	Predicted GO
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Predicted GO
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	8	116

External Links

No external refs found!

Solyc08g079120

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation