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  5. LOC_Os09g38610

LOC_Os09g38610


Description : ZOS9-18 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g38610
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
At1g24625 No alias Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266] 0.03 Orthogroups_2024-Update
Glyma.10G260600 No alias zinc finger protein 7 0.02 Orthogroups_2024-Update
Kfl00062_0070 kfl00062_0070_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os03g05490 No alias ZOS3-02 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
Seita.2G305800.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Seita.8G082400.1 No alias C2H2 subclass ZFP transcription factor 0.02 Orthogroups_2024-Update
Solyc05g009170 No alias Zinc finger family protein (AHRD V3.3 *** B9HWF8_POPTR) 0.03 Orthogroups_2024-Update
Sopen01g001230 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen01g026560 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Predicted GO
BP GO:0000725 recombinational repair IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!