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  5. LOC_Os09g39570

LOC_Os09g39570


Description : beta-amylase, putative, expressed


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g39570
Cluster HCCA clusters: cluster_0112

Target Alias Description ECC score Gene Family Method Actions
A4A49_03669 No alias beta-amylase 2, chloroplastic 0.03 Orthogroups_2024-Update
Bradi1g75610 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Brara.G00610.1 No alias EC_3.2 glycosylase & beta amylase 0.02 Orthogroups_2024-Update
GRMZM2G069486 No alias beta-amylase 2 0.02 Orthogroups_2024-Update
GRMZM5G803981 No alias beta-amylase 5 0.02 Orthogroups_2024-Update
Glyma.01G151800 No alias beta-amylase 2 0.02 Orthogroups_2024-Update
Glyma.17G150100 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
HORVU2Hr1G043920.3 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
Kfl00041_0240 kfl00041_0240_v1.1 (at3g23920 : 477.0) Encodes a chloroplast beta-amylase.... 0.01 Orthogroups_2024-Update
LOC_Os07g47120 No alias beta-amylase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10432035g0010 No alias (at3g23920 : 650.0) Encodes a chloroplast beta-amylase.... 0.04 Orthogroups_2024-Update
MA_10432251g0010 No alias (at4g00490 : 572.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
MA_129283g0010 No alias (at4g17090 : 665.0) Encodes a beta-amylase targeted to... 0.03 Orthogroups_2024-Update
Mp1g06910.1 No alias beta amylase 0.02 Orthogroups_2024-Update
Mp5g02130.1 No alias beta amylase 0.03 Orthogroups_2024-Update
Potri.003G085500 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
Potri.003G143500 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Seita.2G342700.1 No alias EC_3.2 glycosylase & beta amylase 0.02 Orthogroups_2024-Update
Seita.9G544600.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.002G329400.1 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
Solyc01g067660 No alias 1,4-alpha-glucan-maltohydrolase 0.02 Orthogroups_2024-Update
Solyc08g082810 No alias Beta-amylase (AHRD V3.3 *** A0A0V0IFE3_SOLCH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan predictions
MF GO:0016161 beta-amylase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 99 517
No external refs found!