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  5. Solyc08g079270

Solyc08g079270


Description : R2R3MYB transcription factor 42


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g079270
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.02 Orthogroups_2024-Update
Bradi4g04050 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Brara.C02447.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.04 Orthogroups_2024-Update
Glyma.18G040700 No alias myb domain protein 43 0.03 Orthogroups_2024-Update
HORVU4Hr1G052490.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os05g04210 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00005364-RA No alias (at1g22640 : 189.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00028766-RA No alias (at3g01140 : 277.0) Encodes a MIXTA-like MYB gene NOECK... 0.04 Orthogroups_2024-Update
PSME_00032477-RA No alias (at1g66230 : 167.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00036271-RA No alias (at5g57620 : 240.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
Pp1s133_87V6 No alias myb transcription factor 0.04 Orthogroups_2024-Update
Seita.2G400600.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Solyc07g053240 No alias R2R3MYB transcription factor 81 0.02 Orthogroups_2024-Update
Sopen02g036550 No alias Myb-like DNA-binding domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 70 111
IPR001005 SANT/Myb 14 61
No external refs found!