1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os09g39920

LOC_Os09g39920


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os09g39920
Cluster HCCA clusters: cluster_0042

Target Alias Description ECC score Gene Family Method Actions
A4A49_03888 No alias glucomannan 4-beta-mannosyltransferase 2 0.03 Orthogroups_2024-Update
GRMZM2G105631 No alias cellulose synthase-like A02 0.03 Orthogroups_2024-Update
GRMZM2G405567 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G092990.4 No alias EC_2.4 glycosyltransferase & mannan synthase *(CSLA) 0.03 Orthogroups_2024-Update
LOC_Os07g43710 No alias CSLA7 - cellulose synthase-like family A; mannan... 0.04 Orthogroups_2024-Update
LOC_Os10g26630 No alias CSLA2 - cellulose synthase-like family A; mannan... 0.03 Orthogroups_2024-Update
PSME_00002469-RA No alias (at5g03760 : 374.0) encodes a beta-mannan synthase that... 0.02 Orthogroups_2024-Update
PSME_00039709-RA No alias (at5g03760 : 369.0) encodes a beta-mannan synthase that... 0.02 Orthogroups_2024-Update
Sobic.007G090600.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.02 Orthogroups_2024-Update
Solyc08g006310 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASU5_POPTO) 0.03 Orthogroups_2024-Update
Solyc12g088240 No alias Cellulose synthase-like protein (AHRD V3.3 *** L0ASJ1_POPTO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!