LOC_Os10g01570

Description : C-5 cytosine-specific DNA methylase, putative, expressed

Gene families : OG_42_0002722 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os10g01570
Cluster	HCCA clusters: cluster_0143

Target	Alias	Description	ECC score	Gene Family Method	Actions
HORVU4Hr1G065200.2	No alias	DNA chromomethylase *(CMT)	0.02	Orthogroups_2024-Update
Sobic.006G214000.1	No alias	DNA chromomethylase *(CMT)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003896	DNA primase activity	IEP	Predicted GO
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0097747	RNA polymerase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001525	C5_MeTfrase	4	324

External Links

No external refs found!