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  5. LOC_Os10g02090

LOC_Os10g02090


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g02090
Cluster HCCA clusters: cluster_0023

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G042690.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G024880.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g34740 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Seita.1G326300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 172 256
No external refs found!