1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g079620

Solyc08g079620


Description : ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4CNW2_SOLLC)


Gene families : OG_42_0001380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001380_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g079620
Cluster HCCA clusters: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
At1g12410 No alias ATP-dependent Clp protease proteolytic subunit-related... 0.03 Orthogroups_2024-Update
Cre16.g682900 No alias CLP protease proteolytic subunit 2 0.02 Orthogroups_2024-Update
GRMZM2G148106 No alias CLP protease proteolytic subunit 2 0.02 Orthogroups_2024-Update
Glyma.05G053600 No alias CLP protease proteolytic subunit 2 0.04 Orthogroups_2024-Update
Sobic.010G027200.1 No alias proteolytic component *(ClpP2) of mitochondrion Clp-type... 0.03 Orthogroups_2024-Update
evm.model.tig00000842.6 No alias (p56317|clpp_chlvu : 186.0) ATP-dependent Clp protease... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004725 protein tyrosine phosphatase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016149 translation release factor activity, codon specific IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 96 271
No external refs found!