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  5. Solyc08g079720

Solyc08g079720


Description : AT hook motif DNA-binding family protein (AHRD V3.3 *** A0A072TPA5_MEDTR)


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g079720
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
A4A49_17278 No alias at-hook motif nuclear-localized protein 20 0.03 Orthogroups_2024-Update
PSME_00055546-RA No alias (at2g45430 : 196.0) Encodes a nuclear localized AT hook... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 105 217
No external refs found!