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  5. LOC_Os10g06260

LOC_Os10g06260


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0003923 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003923_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g06260
Cluster HCCA clusters: cluster_0090


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 278 295
IPR005162 Retrotrans_gag_dom 100 196
No external refs found!