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  5. LOC_Os10g06630

LOC_Os10g06630


Description : peptidyl-prolyl cis-trans isomerase, putative, expressed


Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g06630
Cluster HCCA clusters: cluster_0017

Target Alias Description ECC score Gene Family Method Actions
Bradi4g38880 No alias rotamase cyclophilin 2 0.02 Orthogroups_2024-Update
Brara.E01328.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... 0.02 Orthogroups_2024-Update
Brara.H01845.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2... 0.03 Orthogroups_2024-Update
Brara.I03835.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... 0.02 Orthogroups_2024-Update
Kfl00133_0120 kfl00133_0120_v1.1 (at5g58710 : 271.0) Encodes cyclophilin ROC7.; rotamase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA InterProScan predictions
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 15 180
No external refs found!