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  5. LOC_Os10g06670

LOC_Os10g06670


Description : U-box protein, putative, expressed


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g06670
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
Brara.C04418.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Glyma.08G000400 No alias plant U-box 25 0.03 Orthogroups_2024-Update
Glyma.12G095000 No alias plant U-box 24 0.03 Orthogroups_2024-Update
MA_83739g0020 No alias (at1g49780 : 403.0) plant U-box 26 (PUB26); FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00026834-RA No alias (at3g19380 : 258.0) plant U-box 25 (PUB25); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00028678-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00054803-RA No alias (at3g52450 : 283.0) Encodes a cytoplasmically localized... 0.02 Orthogroups_2024-Update
Potri.009G100200 No alias plant U-box 26 0.02 Orthogroups_2024-Update
Potri.016G069400 No alias plant U-box 22 0.02 Orthogroups_2024-Update
Potri.016G069500 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Sopen11g027650 No alias U-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!