1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os10g08190

LOC_Os10g08190


Description : transposon protein, putative, CACTA, En/Spm sub-class, expressed


Gene families : OG_42_0000101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g08190
Cluster HCCA clusters: cluster_0080

Target Alias Description ECC score Gene Family Method Actions
Brara.K00924.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os07g15910 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os12g23520 No alias retrotransposon protein, putative, Ty3-gypsy subclass, expressed 0.03 Orthogroups_2024-Update
Solyc05g032810 No alias No description available 0.02 Orthogroups_2024-Update
Sopen02g002150 No alias Transposase family tnp2 0.02 Orthogroups_2024-Update
Sopen08g014610 No alias Transposase family tnp2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
InterPro domains Description Start Stop
IPR004242 Transposase_21 320 465
IPR029480 Transpos_assoc 4 78
No external refs found!