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  5. Solyc08g080060

Solyc08g080060


Description : Expansin-like protein (AHRD V3.3 *** Q0WT83_ARATH)


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g080060
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
A4A49_38718 No alias expansin-a7 0.03 Orthogroups_2024-Update
Bradi2g22290 No alias expansin A1 0.06 Orthogroups_2024-Update
Bradi2g53580 No alias expansin A8 0.03 Orthogroups_2024-Update
Glyma.14G068000 No alias expansin A4 0.05 Orthogroups_2024-Update
Glyma.18G265400 No alias expansin A23 0.03 Orthogroups_2024-Update
LOC_Os02g16780 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g06010 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g60720 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g15840 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g39110 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_40314g0010 No alias (q40636|expa2_orysa : 396.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.03 Orthogroups_2024-Update
PSME_00051759-RA No alias (at2g40610 : 368.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.001G001100 No alias expansin A15 0.02 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.03 Orthogroups_2024-Update
Pp1s196_30V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Pp1s266_66V6 No alias alpha expansin xpa5 0.03 Orthogroups_2024-Update
Pp1s466_14V6 No alias expansin 2 0.02 Orthogroups_2024-Update
Sobic.001G033300.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.004G238801.1 No alias alpha-class expansin 0.04 Orthogroups_2024-Update
Solyc05g052250 No alias Expansin (AHRD V3.3 *** G4XZW3_9GENT) 0.04 Orthogroups_2024-Update
Solyc07g063210 No alias Expansin (AHRD V3.3 *** G4XZZ0_9GENT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 147
IPR007117 Expansin_CBD 158 236
No external refs found!