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  5. Solyc08g080080

Solyc08g080080


Description : WD40 repeat-containing protein (AHRD V3.3 *** A0A103XFY3_CYNCS)


Gene families : OG_42_0002050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g080080
Cluster HCCA clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
At4g11920 No alias Protein FIZZY-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS9] 0.03 Orthogroups_2024-Update
MA_130980g0010 No alias (at4g22910 : 605.0) FIZZY-related 2 (FZR2); FUNCTIONS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005351 carbohydrate:proton symporter activity IEP Predicted GO
MF GO:0005402 carbohydrate:cation symporter activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0008643 carbohydrate transport IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015293 symporter activity IEP Predicted GO
MF GO:0015294 solute:cation symporter activity IEP Predicted GO
MF GO:0015295 solute:proton symporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 200 267
IPR001680 WD40_repeat 291 326
IPR001680 WD40_repeat 420 456
IPR001680 WD40_repeat 331 371
No external refs found!