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  5. Solyc08g080140

Solyc08g080140


Description : 3,5-epimerase/4-reductase (AHRD V3.3 *** I3SMF8_MEDTR)


Gene families : OG_42_0000886 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000886_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc08g080140
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
266803 No alias rhamnose biosynthesis 1 0.02 Orthogroups_2024-Update
A4A49_41849 No alias bifunctional dtdp-4-dehydrorhamnose... 0.06 Orthogroups_2024-Update
Brara.E02654.1 No alias UDP-L-rhamnose synthase *(RHM) 0.03 Orthogroups_2024-Update
Brara.G03594.1 No alias UDP-L-rhamnose synthase *(RHM) 0.05 Orthogroups_2024-Update
Glyma.08G148100 No alias rhamnose biosynthesis 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G059120.2 No alias UDP-L-rhamnose synthase *(RHM) 0.03 Orthogroups_2024-Update
Kfl00409_0080 kfl00409_0080_v1.1 (at1g53500 : 1034.0) encodes a putative NDP-L-rhamnose... 0.02 Orthogroups_2024-Update
PSME_00018936-RA No alias (at1g63000 : 514.0) nucleotide-rhamnose... 0.03 Orthogroups_2024-Update
PSME_00056062-RA No alias (at1g78570 : 1136.0) Encodes a UDP-L-Rhamnose synthase... 0.03 Orthogroups_2024-Update
Potri.011G103700 No alias rhamnose biosynthesis 1 0.03 Orthogroups_2024-Update
Pp1s194_128V6 No alias rhamnose synthase 0.05 Orthogroups_2024-Update
Pp1s263_3V6 No alias rhamnose synthase 0.02 Orthogroups_2024-Update
Pp1s88_1V6 No alias rhamnose synthase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004013 adenosylhomocysteinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006152 purine nucleoside catabolic process IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Predicted GO
MF GO:0016802 trialkylsulfonium hydrolase activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019510 S-adenosylhomocysteine catabolic process IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042219 cellular modified amino acid catabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0044273 sulfur compound catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046130 purine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0046498 S-adenosylhomocysteine metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072523 purine-containing compound catabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR029903 RmlD-like-bd 15 189
No external refs found!