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  5. LOC_Os10g12330

LOC_Os10g12330


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g12330
Cluster HCCA clusters: cluster_0067

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g19050 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc06g034070 No alias AT hook motif-containing protein, putative, expressed... 0.04 Orthogroups_2024-Update
Solyc07g032810 No alias LOW QUALITY:Helicase-like protein (AHRD V3.3 *-* Q9AYF0_ORYSJ) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!