LOC_Os10g12620

Description : protein kinase domain containing protein, expressed

Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os10g12620
Cluster	HCCA clusters: cluster_0084

Target	Alias	Description	ECC score	Gene Family Method
19615	No alias	polyubiquitin 10	0.03	Orthogroups_2024-Update
At4g05050	No alias	Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]	0.02	Orthogroups_2024-Update
Bradi2g12280	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.02	Orthogroups_2024-Update
Bradi4g38540	No alias	ubiquitin extension protein 1	0.02	Orthogroups_2024-Update
Brara.C01815.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Brara.G01965.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Brara.I03566.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Brara.I04302.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Cre01.g007051	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.01	Orthogroups_2024-Update
Cre06.g273600	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.03	Orthogroups_2024-Update
GRMZM2G006293	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.03	Orthogroups_2024-Update
GRMZM2G047732	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.02	Orthogroups_2024-Update
Glyma.01G029200	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.02	Orthogroups_2024-Update
Glyma.02G036000	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.03	Orthogroups_2024-Update
Glyma.09G023700	No alias	Ribosomal protein S27a / Ubiquitin family protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G023660.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Potri.001G025300	No alias	ubiquitin 6	0.03	Orthogroups_2024-Update
Potri.012G024300	No alias	Ubiquitin supergroup;Ribosomal protein L40e	0.02	Orthogroups_2024-Update
Pp1s184_64V6	No alias	ubiquitin extension protein	0.03	Orthogroups_2024-Update
Pp1s241_60V6	No alias	ubiquitin fusion protein	0.02	Orthogroups_2024-Update
Pp1s333_9V6	No alias	ubiquitin fusion protein	0.04	Orthogroups_2024-Update
Pp1s56_39V6	No alias	ubiquitin extension protein	0.03	Orthogroups_2024-Update
Pp1s56_52V6	No alias	ubiquitin extension protein	0.04	Orthogroups_2024-Update
Seita.5G156000.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.03	Orthogroups_2024-Update
Seita.7G270700.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Sobic.001G444800.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Sobic.002G135200.1	No alias	component *(eL40) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Sobic.004G273300.1	No alias	UBQ ubiquitin-fold protein	0.02	Orthogroups_2024-Update
Sobic.009G054800.1	No alias	component *(eS31) of small ribosomal-subunit (SSU) proteome	0.02	Orthogroups_2024-Update
Solyc08g083120	No alias	ubiquitin-ribosomal fusion protein	0.02	Orthogroups_2024-Update
Solyc12g099030	No alias	Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO)	0.02	Orthogroups_2024-Update
Sopen01g029970	No alias	Ubiquitin family	0.03	Orthogroups_2024-Update
Sopen08g031340	No alias	Ubiquitin family	0.02	Orthogroups_2024-Update
Sopen12g033760	No alias	Ubiquitin family	0.03	Orthogroups_2024-Update
evm.model.contig_3445.1	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Predicted GO
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
MF	GO:0005216	ion channel activity	IEP	Predicted GO
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
MF	GO:0008066	glutamate receptor activity	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0022824	transmitter-gated ion channel activity	IEP	Predicted GO
MF	GO:0022834	ligand-gated channel activity	IEP	Predicted GO
MF	GO:0022835	transmitter-gated channel activity	IEP	Predicted GO
MF	GO:0022836	gated channel activity	IEP	Predicted GO
MF	GO:0022838	substrate-specific channel activity	IEP	Predicted GO
MF	GO:0022839	ion gated channel activity	IEP	Predicted GO
MF	GO:0030594	neurotransmitter receptor activity	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
MF	GO:0038023	signaling receptor activity	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
CC	GO:0043226	organelle	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043229	intracellular organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
MF	GO:0060089	molecular transducer activity	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000535	MSP_dom	354	455
IPR000719	Prot_kinase_dom	20	302
IPR000626	Ubiquitin_dom	533	594
IPR000626	Ubiquitin_dom	678	747

External Links

No external refs found!

LOC_Os10g12620

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation