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  5. LOC_Os10g13690

LOC_Os10g13690


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000411 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g13690
Cluster HCCA clusters: cluster_0011

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g22770 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.013G110232 No alias DEAD/DEAH box RNA helicase family protein 0.02 Orthogroups_2024-Update
Sopen08g025380 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.01 Orthogroups_2024-Update
evm.model.contig_462.10 No alias (at1g35530 : 221.0) DEAD/DEAH box RNA helicase family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR029472 Copia-like_N 13 50
IPR013103 RVT_2 578 786
No external refs found!