Solyc08g080540

Description : SolycHsfB2b

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc08g080540
Cluster	HCCA clusters: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
107503	No alias	heat shock transcription factor A1D	0.02	Orthogroups_2024-Update
At2g26150	No alias	Heat stress transcription factor A-2...	0.03	Orthogroups_2024-Update
Bradi1g05550	No alias	heat shock transcription factor A6B	0.02	Orthogroups_2024-Update
Bradi2g48990	No alias	heat shock transcription factor C1	0.03	Orthogroups_2024-Update
Brara.G00630.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Cre09.g387150	No alias	heat shock transcription factor A1D	0.03	Orthogroups_2024-Update
GRMZM2G118047	No alias	heat shock transcription factor C1	0.04	Orthogroups_2024-Update
GRMZM2G165272	No alias	heat shock transcription factor B2A	0.03	Orthogroups_2024-Update
GRMZM2G165972	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
GRMZM2G301485	No alias	heat shock transcription factor B2A	0.04	Orthogroups_2024-Update
Glyma.01G217400	No alias	winged-helix DNA-binding transcription factor family protein	0.05	Orthogroups_2024-Update
Glyma.03G157300	No alias	heat shock transcription factor A6B	0.05	Orthogroups_2024-Update
Glyma.09G143200	No alias	heat shock transcription factor B2A	0.03	Orthogroups_2024-Update
Glyma.10G029600	No alias	heat shock transcription factor A6B	0.04	Orthogroups_2024-Update
Glyma.11G025700	No alias	winged-helix DNA-binding transcription factor family protein	0.05	Orthogroups_2024-Update
Glyma.17G174900	No alias	heat shock factor 4	0.04	Orthogroups_2024-Update
HORVU1Hr1G083420.11	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G080840.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G105770.2	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G047330.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
MpVg00470.1	No alias	No annotation	0.02	Orthogroups_2024-Update
PSME_00055440-RA	No alias	(at3g22830 : 268.0) member of Heat Stress Transcription...	0.04	Orthogroups_2024-Update
Potri.012G138900	No alias	heat shock transcription factor B2A	0.04	Orthogroups_2024-Update
Seita.2G282400.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G095900.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G093200.2	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.007G180300.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sopen06g029130	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0001671	ATPase activator activity	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
MF	GO:0003697	single-stranded DNA binding	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006259	DNA metabolic process	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006270	DNA replication initiation	IEP	Predicted GO
BP	GO:0006281	DNA repair	IEP	Predicted GO
BP	GO:0006298	mismatch repair	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0030983	mismatched DNA binding	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0033554	cellular response to stress	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
CC	GO:0042555	MCM complex	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0051716	cellular response to stimulus	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO
MF	GO:0060590	ATPase regulator activity	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	25	114

External Links

No external refs found!

Solyc08g080540

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation