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  5. Solyc08g080580

Solyc08g080580


Description : Myb (AHRD V3.3 *** Q948S4_TOBAC)


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g080580
Cluster HCCA clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
At1g26780 No alias MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3] 0.03 Orthogroups_2024-Update
At5g39700 No alias Myb domain protein 89 [Source:UniProtKB/TrEMBL;Acc:Q9SPG4] 0.02 Orthogroups_2024-Update
Bradi1g30252 No alias myb domain protein r1 0.02 Orthogroups_2024-Update
Bradi1g48525 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Bradi3g36740 No alias myb domain protein 105 0.02 Orthogroups_2024-Update
Brara.A03573.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G121570 No alias myb domain protein 119 0.02 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.02 Orthogroups_2024-Update
Glyma.14G063400 No alias myb domain protein 109 0.04 Orthogroups_2024-Update
Mp3g02830.1 No alias transcription factor (MYB) 0.02 Orthogroups_2024-Update
Potri.001G347200 No alias myb domain protein 118 0.03 Orthogroups_2024-Update
Potri.003G123800 No alias Homeodomain-like protein 0.03 Orthogroups_2024-Update
Potri.015G077700 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Pp1s10_267V6 No alias r2r3-myb transcription factor 0.04 Orthogroups_2024-Update
Pp1s91_13V6 No alias F24J1.31; myb family transcription factor (MYB105)... 0.02 Orthogroups_2024-Update
Seita.2G140900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G129000.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G070900.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 106 152
IPR001005 SANT/Myb 57 100
IPR001005 SANT/Myb 158 202
No external refs found!