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  5. LOC_Os10g20470

LOC_Os10g20470


Description : MATE efflux family protein, putative, expressed


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g20470
Cluster HCCA clusters: cluster_0060

Target Alias Description ECC score Gene Family Method Actions
Bradi1g34660 No alias MATE efflux family protein 0.01 Orthogroups_2024-Update
Bradi1g66270 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Glyma.10G267400 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G068090.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Kfl00030_0420 kfl00030_0420_v1.1 (at5g52450 : 272.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Kfl00232_0040 kfl00232_0040_v1.1 (at1g73700 : 281.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Kfl00258_0100 kfl00258_0100_v1.1 (at5g52450 : 338.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
Kfl00471_0030 kfl00471_0030_v1.... (at4g23030 : 251.0) MATE efflux family protein;... 0.01 Orthogroups_2024-Update
Potri.011G002400 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Seita.4G145400.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Seita.7G064100.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 47 207
IPR002528 MATE_fam 268 431
No external refs found!