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  5. Solyc08g080960

Solyc08g080960


Description : AT hook motif DNA-binding family protein, putative (AHRD V3.3 *** A0A061G6C0_THECC)


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g080960
Cluster HCCA clusters: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Brara.D02771.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Brara.H00907.1 No alias AHL clade-B transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G164489 No alias AT hook motif DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.04G014600 No alias AT hook motif DNA-binding family protein 0.05 Orthogroups_2024-Update
PSME_00047161-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Sopen09g003710 No alias Domain of unknown function (DUF296) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 166 281
No external refs found!