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  5. LOC_Os10g21980

LOC_Os10g21980


Description : transposon protein, putative, CACTA, En/Spm sub-class, expressed


Gene families : OG_42_0000101 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g21980
Cluster HCCA clusters: cluster_0003

Target Alias Description ECC score Gene Family Method Actions
A4A49_41017 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.J00566.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen02g002150 No alias Transposase family tnp2 0.02 Orthogroups_2024-Update
Sopen05g023540 No alias Transposase family tnp2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR029480 Transpos_assoc 5 79
IPR025452 DUF4218 703 813
IPR004242 Transposase_21 307 517
IPR025312 DUF4216 969 1040
IPR004252 Probable_transposase_24 1426 1509
No external refs found!