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  5. LOC_Os10g24370

LOC_Os10g24370


Description : retrotransposon, putative, centromere-specific, expressed


Gene families : OG_42_0000205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g24370
Cluster HCCA clusters: cluster_0039

Target Alias Description ECC score Gene Family Method Actions
Bradi5g22540 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os06g04690 No alias OsFBX184 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g04980 No alias OsFBX185 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
Sobic.001G095366.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!