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  5. LOC_Os10g26530

LOC_Os10g26530


Description : retrotransposon protein, putative, unclassified


Gene families : OG_42_0000438 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g26530
Cluster HCCA clusters: cluster_0022

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G059590.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G031770.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G068670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os06g19100 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g11320 No alias expressed protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 113 197
No external refs found!