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  5. LOC_Os10g28330

LOC_Os10g28330


Description : ZOS10-04 - C2H2 zinc finger protein, expressed


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g28330
Cluster HCCA clusters: cluster_0021

Target Alias Description ECC score Gene Family Method Actions
Sobic.001G469100.2 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Solyc11g069240 No alias Zinc finger family protein (AHRD V3.3 *** S8C619_9LAMI) 0.02 Orthogroups_2024-Update
Sopen04g033710 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
Sopen09g027420 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen09g029630 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!