1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g081620

Solyc08g081620


Description : LEU13054 endo-1,4-beta-glucanase precursor


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g081620
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
A4A49_16190 No alias endoglucanase 0.07 Orthogroups_2024-Update
A4A49_24186 No alias endoglucanase 19 0.08 Orthogroups_2024-Update
At1g19940 No alias Endoglucanase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI9] 0.03 Orthogroups_2024-Update
Bradi3g59810 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
Brara.G03044.1 No alias class-B endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Brara.I03254.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Glyma.04G025000 No alias glycosyl hydrolase 9B7 0.03 Orthogroups_2024-Update
Glyma.05G236400 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
Glyma.06G323100 No alias cellulase 3 0.03 Orthogroups_2024-Update
Seita.4G108700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G017300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g081300 No alias Endoglucanase (AHRD V3.3 *** K4BVK9_SOLLC) 0.04 Orthogroups_2024-Update
Sopen09g004950 No alias Glycosyl hydrolase family 9 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 27 473
No external refs found!