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  5. LOC_Os10g28860

LOC_Os10g28860


Description : MBTB39 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed


Gene families : OG_42_0000025 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os10g28860
Cluster HCCA clusters: cluster_0071

Target Alias Description ECC score Gene Family Method Actions
270271 No alias BTB-POZ and MATH domain 4 0.01 Orthogroups_2024-Update
At5g19000 No alias BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0] 0.03 Orthogroups_2024-Update
Bradi3g41280 No alias BTB-POZ and MATH domain 1 0.02 Orthogroups_2024-Update
GRMZM2G074323 No alias BTB-POZ and MATH domain 4 0.02 Orthogroups_2024-Update
HORVU5Hr1G108760.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G108800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os11g41260 No alias snRNP protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00047355-RA No alias (at3g03740 : 243.0) BTB-POZ and MATH domain 4 (BPM4);... 0.02 Orthogroups_2024-Update
Seita.4G267700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G215700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G216700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G024300.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 191 309
IPR002083 MATH/TRAF_dom 45 145
No external refs found!